Genome Meta Information: Campylobacter gracilis NCTC12738 (GCA_900446335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900446335.1 | ||
| HOMD Taxon-ID | HMT-0623 | ||
| Species Name (in use by HOMD) | Campylobacter gracilis | ||
| Organism Name (as deposited) | HMT-623 Campylobacter gracilis NCTC12738 | ||
| Strain or Isolate | NCTC12738 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B gracilis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,268,496 (bp) | ||
| GC Percentage | 46.56 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/446/335/GCA_900446335.1_53205_B01 | ||
| CDS | 2124 | ||
| Genes | 2176 | ||
| mRNA | 2176 | ||
| misc RNA | 4 | ||
| rRNA | 5 | ||
| tRNA | 42 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 94.63 % | ||
| CheckM Contamination | 1.22 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 53205_B01 |
| GenBank Assembly Accession | GCA_900446335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900446335.1 [NCBI] |
| BioSample | SAMEA80446918 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-09-20T08:06:36.036 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFUN01 |
| NCBI TaxID | 824 |
| Isolation Source | Gingival sulcus |
| Geo Location | USA |
