Genome Meta Information: Campylobacter ureolyticus NCTC12015 (GCA_900446685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900446685.1 | ||
| HOMD Taxon-ID | HMT-0842 | ||
| Species Name (in use by HOMD) | Campylobacter ureolyticus | ||
| Organism Name (as deposited) | HMT-842 Campylobacter ureolyticus NCTC12015 | ||
| Strain or Isolate | NCTC12015 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B ureolyticus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 1,589,092 (bp) | ||
| GC Percentage | 29.31 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/446/685/GCA_900446685.1_57530_E01 | ||
| CDS | 1606 | ||
| Genes | 1662 | ||
| mRNA | 1662 | ||
| misc RNA | 5 | ||
| rRNA | 6 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.91 % | ||
| CheckM Completeness | 97.29 % | ||
| CheckM Contamination | 1.08 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 57530_E01 |
| GenBank Assembly Accession | GCA_900446685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900446685.1 [NCBI] |
| BioSample | SAMEA104167216 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2018-01-10T08:06:09.850 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFVL01 |
| NCBI TaxID | 827 |
| Isolation Source | urethra |
| Geo Location | |
