Genome Meta Information: Haemophilus parahaemolyticus NCTC10794 (GCA_900450875.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900450875.1 | ||
| HOMD Taxon-ID | HMT-0945 | ||
| Species Name (in use by HOMD) | Haemophilus parahaemolyticus | ||
| Organism Name (as deposited) | HMT-945 Haemophilus parahaemolyticus NCTC10794 | ||
| Strain or Isolate | NCTC10794 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Haemophilus_A; s__Haemophilus_A parahaemolyticus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,163,754 (bp) | ||
| GC Percentage | 40.18 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/450/875/GCA_900450875.1_33922_E01 | ||
| CDS | 2167 | ||
| Genes | 2273 | ||
| mRNA | 2273 | ||
| misc RNA | 26 | ||
| rRNA | 19 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 95.99 % | ||
| CheckM Completeness | 92.35 % | ||
| CheckM Contamination | 0.21 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 33922_E01 |
| GenBank Assembly Accession | GCA_900450875.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900450875.1 [NCBI] |
| BioSample | SAMEA3207626 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2015-02-25T11:25:14.210 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UGHH01 |
| NCBI TaxID | 735 |
| Isolation Source | not available: to be reported later |
| Geo Location | |
