Genome Meta Information: Streptococcus mutans NCTC10923 (GCA_900459345.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900459345.1 | ||
| HOMD Taxon-ID | HMT-0686 | ||
| Species Name (in use by HOMD) | Streptococcus mutans | ||
| Organism Name (as deposited) | HMT-686 Streptococcus mutans NCTC10923 | ||
| Strain or Isolate | NCTC10923 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mutans |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,022,743 (bp) | ||
| GC Percentage | 37.05 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/459/345/GCA_900459345.1_36725_E02 | ||
| CDS | 1886 | ||
| Genes | 2017 | ||
| mRNA | 2017 | ||
| misc RNA | 53 | ||
| rRNA | 15 | ||
| tRNA | 62 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.04 % | ||
| CheckM Completeness | 95.87 % | ||
| CheckM Contamination | 1.06 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 36725_E02 |
| GenBank Assembly Accession | GCA_900459345.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900459345.1 [NCBI] |
| BioSample | SAMEA3307891 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2015-06-10T08:09:19.100 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UHFQ01 |
| NCBI TaxID | 1309 |
| Isolation Source | not available: to be reported later |
| Geo Location | United Kingdom |
