Genome Meta Information: Streptococcus infantis NCTC13771 (GCA_900459415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900459415.1 | ||
| HOMD Taxon-ID | HMT-0638 | ||
| Species Name (in use by HOMD) | Streptococcus infantis | ||
| Organism Name (as deposited) | HMT-638 Streptococcus infantis clade-638 NCTC13771 | ||
| Strain or Isolate | NCTC13771 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus infantis |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,023,648 (bp) | ||
| GC Percentage | 38.9 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/459/415/GCA_900459415.1_45473_C02 | ||
| CDS | 1991 | ||
| Genes | 2101 | ||
| mRNA | 0 | ||
| misc RNA | 37 | ||
| rRNA | 12 | ||
| tRNA | 60 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.32 % | ||
| CheckM Contamination | 3.55 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
2) OpenAnvi`o (Interactive) OpenSVG (Preview) |
||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 45473_C02 |
| GenBank Assembly Accession | GCA_900459415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900459415.1 [NCBI] |
| BioSample | SAMEA3905383 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-06-15T09:07:30.763 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UHFU01 |
| NCBI TaxID | 68892 |
| Isolation Source | not available: to be reported later |
| Geo Location | |
