Genome Meta Information: Campylobacter ureolyticus NCTC10941 (GCA_900460885.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900460885.1 | ||
| HOMD Taxon-ID | HMT-0842 | ||
| Species Name (in use by HOMD) | Campylobacter ureolyticus | ||
| Organism Name (as deposited) | HMT-842 Campylobacter ureolyticus NCTC10941 | ||
| Strain or Isolate | NCTC10941 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Campylobacteraceae;g__Campylobacter_B; s__Campylobacter_B ureolyticus |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 1,833,655 (bp) | ||
| GC Percentage | 28.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/460/885/GCA_900460885.1_53694_D01 | ||
| CDS | 1816 | ||
| Genes | 1878 | ||
| mRNA | 1878 | ||
| misc RNA | 6 | ||
| rRNA | 8 | ||
| tRNA | 47 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 97.44 % | ||
| CheckM Contamination | 0.95 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 53694_D01 |
| GenBank Assembly Accession | GCA_900460885.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900460885.1 [NCBI] |
| BioSample | SAMEA87358168 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-09-20T08:06:36.596 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFUU01 |
| NCBI TaxID | 827 |
| Isolation Source | amniotic fluid |
| Geo Location | Canada: Alberta |
