Genome Meta Information: Cardiobacterium valvarum NCTC13294 (GCA_900460955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900460955.1 | ||
| HOMD Taxon-ID | HMT-0540 | ||
| Species Name (in use by HOMD) | Cardiobacterium valvarum | ||
| Organism Name (as deposited) | HMT-540 Cardiobacterium valvarum NCTC13294 | ||
| Strain or Isolate | NCTC13294 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Cardiobacteriales;f__Cardiobacteriaceae;g__Cardiobacterium; s__Cardiobacterium valvarum |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,755,518 (bp) | ||
| GC Percentage | 57.98 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/460/955/GCA_900460955.1_51726_F01 | ||
| CDS | 2626 | ||
| Genes | 2705 | ||
| mRNA | 2705 | ||
| misc RNA | 16 | ||
| rRNA | 9 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.97 % | ||
| CheckM Completeness | 97.08 % | ||
| CheckM Contamination | 4.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 51726_F01 |
| GenBank Assembly Accession | GCA_900460955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900460955.1 [NCBI] |
| BioSample | SAMEA4412709 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-02-01T09:06:26.066 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UFUW01 |
| NCBI TaxID | 194702 |
| Isolation Source | Blood culture |
| Geo Location | |
