Genome Meta Information: Corynebacterium jeikeium NCTC11917 (GCA_900461255.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900461255.1 | ||
| HOMD Taxon-ID | HMT-0047 | ||
| Species Name (in use by HOMD) | Corynebacterium jeikeium | ||
| Organism Name (as deposited) | HMT-047 Corynebacterium jeikeium NCTC11917 | ||
| Strain or Isolate | NCTC11917 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium jeikeium |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,500,328 (bp) | ||
| GC Percentage | 61.36 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/461/255/GCA_900461255.1_46983_H01 | ||
| CDS | 2158 | ||
| Genes | 2228 | ||
| mRNA | 0 | ||
| misc RNA | 7 | ||
| rRNA | 9 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.9 % | ||
| CheckM Completeness | 98.53 % | ||
| CheckM Contamination | 2.26 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 46983_H01 |
| GenBank Assembly Accession | GCA_900461255.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900461255.1 [NCBI] |
| BioSample | SAMEA4017710 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-08-17T12:12:16.503 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | UIGW01 |
| NCBI TaxID | 38289 |
| Isolation Source | Vagina |
| Geo Location | United Kingdom: Surrey |
