Genome Meta Information: Corynebacterium jeikeium NCTC11914 (GCA_900477975.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900477975.1 | ||
| HOMD Taxon-ID | HMT-0047 | ||
| Species Name (in use by HOMD) | Corynebacterium jeikeium | ||
| Organism Name (as deposited) | HMT-047 Corynebacterium jeikeium NCTC11914 | ||
| Strain or Isolate | NCTC11914 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium jeikeium |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 380 | ||
| Contigs |
|
||
| Total Sequence Length | 2,414,649 (bp) | ||
| GC Percentage | 61.75 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/477/975/GCA_900477975.1_46983_G01 | ||
| CDS | 2057 | ||
| Genes | 2123 | ||
| mRNA | 0 | ||
| misc RNA | 6 | ||
| rRNA | 9 | ||
| tRNA | 50 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.96 % | ||
| CheckM Completeness | 95.93 % | ||
| CheckM Contamination | 2.15 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 46983_G01 |
| GenBank Assembly Accession | GCA_900477975.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900477975.1 [NCBI] |
| BioSample | SAMEA4017709 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2016-08-17T12:12:16.440 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 38289 |
| Isolation Source | blood |
| Geo Location | United Kingdom: London |
