Genome Meta Information: Treponema denticola Marseille-5-CSURP7640 (GCA_900497605.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900497605.1 | ||
| HOMD Taxon-ID | HMT-0584 | ||
| Species Name (in use by HOMD) | Treponema denticola | ||
| Organism Name (as deposited) | HMT-584 Treponema denticola Marseille-5-CSURP7640 | ||
| Strain or Isolate | Marseille-5-CSURP7640 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Spirochaetota;c__Spirochaetia;o__Treponematales;f__Treponemataceae;g__Treponema_B; s__Treponema_B denticola |
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| Sequencing Technology | |||
| Genome Coverage | |||
| Contigs |
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| Total Sequence Length | 2,795,521 (bp) | ||
| GC Percentage | 38.1 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/497/605/GCA_900497605.1_PRJEB27762 | ||
| CDS | 2583 | ||
| Genes | 2643 | ||
| mRNA | 2643 | ||
| misc RNA | 11 | ||
| rRNA | 5 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 0 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | |
| GenBank Assembly Accession | GCA_900497605.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | [NCBI] |
| BioProject | [NCBI] |
| Submitter | |
| Submission Date | |
| Assembly Method | |
| Assembly Level | |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | |
| Isolation Source | |
| Geo Location | |
