Genome Meta Information: Bifidobacterium longum NCTC11818 (GCA_900637335.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900637335.1 | ||
| HOMD Taxon-ID | HMT-0862 | ||
| Species Name (in use by HOMD) | Bifidobacterium longum | ||
| Organism Name (as deposited) | HMT-862 Bifidobacterium longum NCTC11818 | ||
| Strain or Isolate | NCTC11818 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Bifidobacteriaceae;g__Bifidobacterium; s__Bifidobacterium longum |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,385,160 (bp) | ||
| GC Percentage | 60.33 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/637/335/GCA_900637335.1_50618_H02 | ||
| CDS | 1944 | ||
| Genes | 2043 | ||
| mRNA | 2043 | ||
| misc RNA | 13 | ||
| rRNA | 8 | ||
| tRNA | 77 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 98.91 % | ||
| CheckM Contamination | 0.16 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 50618_H02 |
| GenBank Assembly Accession | GCA_900637335.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900637335.1 [NCBI] |
| BioSample | SAMEA4412687 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2017-01-25T12:05:51.776 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 216816 |
| Isolation Source | intestine |
| Geo Location | |
