Genome Meta Information: Neisseria weaveri NCTC12742 (GCA_900638685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900638685.1 | ||
| HOMD Taxon-ID | HMT-0092 | ||
| Species Name (in use by HOMD) | Neisseria weaveri | ||
| Organism Name (as deposited) | HMT-092 Neisseria weaveri NCTC12742 | ||
| Strain or Isolate | NCTC12742 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria; s__Neisseria weaveri |
||
| Sequencing Technology | PacBio | ||
| Genome Coverage | 100 | ||
| Contigs |
|
||
| Total Sequence Length | 2,238,481 (bp) | ||
| GC Percentage | 49.09 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/638/685/GCA_900638685.1_58882_C02 | ||
| CDS | 2021 | ||
| Genes | 2103 | ||
| mRNA | 2103 | ||
| misc RNA | 13 | ||
| rRNA | 12 | ||
| tRNA | 55 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | 99.99 % | ||
| CheckM Completeness | 99.25 % | ||
| CheckM Contamination | 1.16 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 58882_C02 |
| GenBank Assembly Accession | GCA_900638685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900638685.1 [NCBI] |
| BioSample | SAMEA104338429 [NCBI] |
| BioProject | PRJEB6403 [NCBI] |
| Submitter | SC |
| Submission Date | 2018-03-23T16:18:43.813 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 28091 |
| Isolation Source | wound |
| Geo Location | Sweden: Gothenberg |
