Genome Meta Information: Streptococcus pneumoniae 2245STDY6178787 (GCA_900693025.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_900693025.1 | ||
| HOMD Taxon-ID | HMT-0734 | ||
| Species Name (in use by HOMD) | Streptococcus pneumoniae | ||
| Organism Name (as deposited) | HMT-734 Streptococcus pneumoniae 2245STDY6178787 | ||
| Strain or Isolate | 2245STDY6178787 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus pneumoniae |
||
| Sequencing Technology | SLX | ||
| Genome Coverage | 150 | ||
| Contigs |
|
||
| Total Sequence Length | 2,202,359 (bp) | ||
| GC Percentage | 39.41 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/693/025/GCA_900693025.1_19341_2_86-2 | ||
| CDS | 2210 | ||
| Genes | 2350 | ||
| mRNA | 2350 | ||
| misc RNA | 89 | ||
| rRNA | 5 | ||
| tRNA | 45 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.69 % | ||
| CheckM Completeness | 98.54 % | ||
| CheckM Contamination | 0.88 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 19341_2#86-2 |
| GenBank Assembly Accession | GCA_900693025.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_900693025.1 [NCBI] |
| BioSample | SAMEA3713867 [NCBI] |
| BioProject | PRJEB31141 [NCBI] |
| Submitter | WTSI |
| Submission Date | 2016-06-15T09:07:15.700 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1313 |
| Isolation Source | clinical specimen |
| Geo Location | China |
