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Genome Meta Information:
Rothia mucilaginosa HGM02437 (GCA_900755465.1)
| HOMD Genome-ID | GCA_900755465.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 HGM02437 |
| Strain or Isolate | HGM02437 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia sp902373285 |
| Sequencing Technology | |
| Genome Coverage | 37.0x |
| Contigs |
Number of Contigs: 120
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| Total Sequence Length | 2,136,992 (bp) |
| GC Percentage | 60.17 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/900/755/465/GCA_900755465.1_ERS473172_3 |
| CDS | 1685 |
| Genes | 1753 |
| mRNA | 1753 |
| misc RNA | 12 |
| rRNA | 4 |
| tRNA | 51 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
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| Genome Assembly Name | ERS473172_3 |
| GenBank Assembly Accession |
GCA_900755465.1
[NCBI]
[GTDB]
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| RefSeq Assembly Accession |
GCF_900755465.1
[NCBI]
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| BioSample |
SAMEA5278419
[NCBI]
|
| BioProject |
PRJEB31003
[NCBI]
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| Submitter | DOE JGI |
| Submission Date | 2019-02-01T10:07:41.696 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | CAAEGP01 |
| NCBI TaxID | 316088 |
| Isolation Source | human stool |
| Geo Location | Sweden |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 96.85 % |
| CheckM Percentile | 62.7907 % |
| CheckM Contamination | 0.64 % |
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