Taxon Table | Genome Table
Genome Meta Information:
Fusobacterium
periodonticum
Fusobacterium_periodonticum_BgEED13 (GCA_901873395.1)
| HOMD Genome-ID |
GCA_901873395.1
|
| HOMD Taxon-ID |
HMT-0201
|
| Species Name (in use by HOMD) |
Fusobacterium periodonticum
|
| Organism Name (as deposited) |
HMT-201 Fusobacterium periodonticum Fusobacterium_periodonticum_BgEED13
|
| Strain or Isolate |
Fusobacterium_periodonticum_BgEED13
|
GTDB (V226)
Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium;
s__Fusobacterium periodonticum_D |
| Sequencing Technology |
Illumina HiSeq
|
| Genome Coverage |
37
|
| Contigs |
Number of Contigs: 136
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
2,561,874 (bp) |
| GC Percentage |
27.8
|
| MAG |
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/901/873/395/GCA_901873395.1_Fusobacterium_periodonticum_BgEED13
|
| CDS |
2435
|
| Genes |
2494
|
| mRNA |
2494
|
| misc RNA |
19
|
| rRNA |
3
|
| tRNA |
36
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
93.04 %
|
| CheckM Completeness |
97.05 %
|
| CheckM Contamination |
0.03 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
Difference
between
CheckM and CheckM2
Completeness |
200.0 %
|
| CRISPR-cas |
3 Contigs
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
Fusobacterium_periodonticum_Bg
|
| GenBank Assembly Accession |
GCA_901873395.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_901873395.1
[NCBI]
|
| BioSample |
SAMEA5664357
[NCBI]
|
| BioProject |
PRJEB32184
[NCBI]
|
| Submitter |
WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES
|
| Submission Date |
2021-02-06T10:36:54.643
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CABFLP01
|
| NCBI TaxID |
860
|
| Isolation Source |
|
| Geo Location |
|
