Genome Meta Information: Fusobacterium vincentii Fusobacterium_nucleatum_BgEED12 (GCA_901873415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_901873415.1 | ||
| HOMD Taxon-ID | HMT-0200 | ||
| Species Name (in use by HOMD) | Fusobacterium vincentii | ||
| Organism Name (as deposited) | HMT-200 Fusobacterium vincentii Fusobacterium_nucleatum_BgEED12 | ||
| Strain or Isolate | Fusobacterium_nucleatum_BgEED12 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Fusobacteriota;c__Fusobacteriia;o__Fusobacteriales;f__Fusobacteriaceae;g__Fusobacterium; s__Fusobacterium vincentii |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 61 | ||
| Contigs |
|
||
| Total Sequence Length | 2,208,650 (bp) | ||
| GC Percentage | 27.26 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/901/873/415/GCA_901873415.1_Fusobacterium_nucleatum_BgEED12 | ||
| CDS | 2036 | ||
| Genes | 2108 | ||
| mRNA | 2108 | ||
| misc RNA | 24 | ||
| rRNA | 3 | ||
| tRNA | 44 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 92.57 % | ||
| CheckM Completeness | 98.37 % | ||
| CheckM Contamination | 0.41 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Fusobacterium_nucleatum_BgEED1 |
| GenBank Assembly Accession | GCA_901873415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_901873415.1 [NCBI] |
| BioSample | SAMEA5664356 [NCBI] |
| BioProject | PRJEB32184 [NCBI] |
| Submitter | WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES |
| Submission Date | 2021-02-06T10:37:42.643 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABFLE01 |
| NCBI TaxID | 851 |
| Isolation Source | |
| Geo Location | |
