Genome Meta Information: Veillonella parvula Veillonella_parvula_BgEED39 (GCA_901876955.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_901876955.1 | ||
| HOMD Taxon-ID | HMT-0161 | ||
| Species Name (in use by HOMD) | Veillonella parvula | ||
| Organism Name (as deposited) | HMT-161 Veillonella parvula Veillonella_parvula_BgEED39 | ||
| Strain or Isolate | Veillonella_parvula_BgEED39 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Negativicutes;o__Veillonellales;f__Veillonellaceae;g__Veillonella; s__Veillonella parvula_E |
||
| Sequencing Technology | Illumina HiSeq | ||
| Genome Coverage | 38 | ||
| Contigs |
|
||
| Total Sequence Length | 2,125,241 (bp) | ||
| GC Percentage | 38.61 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/901/876/955/GCA_901876955.1_Veillonella_parvula_BgEED39 | ||
| CDS | 1916 | ||
| Genes | 1981 | ||
| mRNA | 1981 | ||
| misc RNA | 21 | ||
| rRNA | 4 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.66 % | ||
| CheckM Completeness | 95.22 % | ||
| CheckM Contamination | 0.99 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Veillonella_parvula_BgEED39 |
| GenBank Assembly Accession | GCA_901876955.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_901876955.1 [NCBI] |
| BioSample | SAMEA5664383 [NCBI] |
| BioProject | PRJEB32184 [NCBI] |
| Submitter | WASHINGTON UNIVERSITY CENTER FOR GENOME SCIENCES |
| Submission Date | 2021-02-06T10:37:12.033 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABFMP01 |
| NCBI TaxID | 29466 |
| Isolation Source | |
| Geo Location | |
