Genome Meta Information: Streptococcus mitis 4928STDY7071560 (GCA_902159415.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902159415.1 | ||
| HOMD Taxon-ID | HMT-677 | ||
| Species Name (in use by HOMD) | Streptococcus mitis | ||
| Organism Name (as deposited) | HMT-677 Streptococcus mitis 4928STDY7071560 | ||
| Strain or Isolate | 4928STDY7071560 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus mitis_BG |
||
| Sequencing Technology | |||
| Genome Coverage | 175.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,709,483 (bp) | ||
| GC Percentage | 38.93 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/159/415/GCA_902159415.1_25426_7_64 | ||
| CDS | 1684 | ||
| Genes | 1775 | ||
| mRNA | 1775 | ||
| misc RNA | 32 | ||
| rRNA | 5 | ||
| tRNA | 53 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 84.54 % | ||
| CheckM Completeness | 99.32 % | ||
| CheckM Contamination | 0.42 % | ||
| CheckM2 Completeness | 99.94 % | ||
| CheckM2 Contamination | 0.14 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Streptococcus__mitis__HMT_677
(Interactive)
View SVG Image |
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | 25426_7#64 |
| GenBank Assembly Accession | GCA_902159415.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_902159415.1 [NCBI] |
| BioSample | SAMEA104567666 [NCBI] |
| BioProject | PRJEB22252 [NCBI] |
| Submitter | SC |
| Submission Date | 2019-06-29T08:07:48.093 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABGJU01 |
| NCBI TaxID | 28037 |
| Isolation Source | faecal |
| Geo Location | United Kingdom |
