Genome Meta Information: Streptococcus vestibularis Streptococcus_salivarius_SS_Bg39 (GCA_902167825.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902167825.1 | ||
| HOMD Taxon-ID | HMT-0021 | ||
| Species Name (in use by HOMD) | Streptococcus vestibularis | ||
| Organism Name (as deposited) | HMT-021 Streptococcus vestibularis Streptococcus_salivarius_SS_Bg39 | ||
| Strain or Isolate | Streptococcus_salivarius_SS_Bg39 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Bacillota;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus; s__Streptococcus vestibularis |
||
| Sequencing Technology | Illumina MiSeq | ||
| Genome Coverage | 234 | ||
| Contigs |
|
||
| Total Sequence Length | 2,029,376 (bp) | ||
| GC Percentage | 39.51 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/167/825/GCA_902167825.1_Streptococcus_salivarius_SS_Bg39 | ||
| CDS | 1897 | ||
| Genes | 1988 | ||
| mRNA | 1988 | ||
| misc RNA | 36 | ||
| rRNA | 6 | ||
| tRNA | 48 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 96.74 % | ||
| CheckM Completeness | 99.63 % | ||
| CheckM Contamination | 0.39 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | Streptococcus_salivarius_SS_Bg |
| GenBank Assembly Accession | GCA_902167825.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_902167825.1 [NCBI] |
| BioSample | SAMEA5771516 [NCBI] |
| BioProject | PRJEB26419 [NCBI] |
| Submitter | The Edison Family Center of Genome Sciences and Systems Biology |
| Submission Date | 2019-07-14T10:19:51.900 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABHNJ01 |
| NCBI TaxID | 1343 |
| Isolation Source | |
| Geo Location | |
