Genome Meta Information: Actinomyces sp. HMT-403 MGYG-HGUT-00112 (GCA_902363285.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902363285.1 | ||
| HOMD Taxon-ID | HMT-403 | ||
| Species Name (in use by HOMD) | Actinomyces sp. HMT-403 | ||
| Organism Name (as deposited) | HMT-403 Actinomyces sp. HMT-403 MGYG-HGUT-00112 | ||
| Strain or Isolate | MGYG-HGUT-00112 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces sp900323545 |
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| Sequencing Technology | |||
| Genome Coverage | 10.0x | ||
| Contigs |
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| Total Sequence Length | 3,112,947 (bp) | ||
| GC Percentage | 68.4 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/363/285/GCA_902363285.1_MGYG-HGUT-00112 | ||
| CDS | 2572 | ||
| Genes | 2647 | ||
| mRNA | 2647 | ||
| misc RNA | 13 | ||
| rRNA | 5 | ||
| tRNA | 55 | ||
| tmRNA | 2 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 100 % | ||
| CheckM Contamination | 0.47 % | ||
| CheckM2 Completeness | 100 % | ||
| CheckM2 Contamination | 0.58 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | MGYG-HGUT-00112 |
| GenBank Assembly Accession | GCA_902363285.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_902363285.1 [NCBI] |
| BioSample | SAMEA5849613 [NCBI] |
| BioProject | PRJEB33885 [NCBI] |
| Submitter | EMG |
| Submission Date | 2019-08-07T10:17:11.256 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABIZR01 |
| NCBI TaxID | 1898202 |
| Isolation Source | human gut |
| Geo Location | not provided |
