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Genome Meta Information:
Rothia mucilaginosa MGYG-HGUT-00307 (GCA_902461255.1)
| HOMD Genome-ID | GCA_902461255.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 MGYG-HGUT-00307 |
| Strain or Isolate | MGYG-HGUT-00307 |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia mucilaginosa |
| Sequencing Technology | |
| Genome Coverage | 10.0x |
| Contigs |
Number of Contigs: 186
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| Total Sequence Length | 2,184,222 (bp) |
| GC Percentage | 59.54 |
| MAG | |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/461/255/GCA_902461255.1_UHGG-TPA_MGYG-HGUT-00307 |
| CDS | 1755 |
| Genes | 1816 |
| mRNA | 1816 |
| misc RNA | 12 |
| rRNA | 3 |
| tRNA | 45 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
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| Genome Assembly Name | UHGG-TPA_MGYG-HGUT-00307 |
| GenBank Assembly Accession |
GCA_902461255.1
[NCBI]
[GTDB]
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| RefSeq Assembly Accession |
GCF_902461255.1
[NCBI]
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| BioSample |
SAMEA5849809
[NCBI]
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| BioProject |
PRJEB33885
[NCBI]
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| Submitter | EMG |
| Submission Date | 2019-08-07T10:17:17.350 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | CABPWP01 |
| NCBI TaxID | 316088 |
| Isolation Source | human gut |
| Geo Location | Sweden |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 91.28 % |
| CheckM Percentile | 43.023254 % |
| CheckM Contamination | 1.75 % |
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