Genome Meta Information: Actinomyces graevenitzii MGYG-HGUT-03014 (GCA_902481625.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902481625.1 | ||
| HOMD Taxon-ID | HMT-866 | ||
| Species Name (in use by HOMD) | Actinomyces graevenitzii | ||
| Organism Name (as deposited) | HMT-866 Actinomyces graevenitzii MGYG-HGUT-03014 | ||
| Strain or Isolate | MGYG-HGUT-03014 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces; s__Actinomyces graevenitzii |
||
| Sequencing Technology | |||
| Genome Coverage | 10.0x | ||
| Contigs |
|
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| Total Sequence Length | 1,770,918 (bp) | ||
| GC Percentage | 58.22 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/481/625/GCA_902481625.1_UHGG-TPA_MGYG-HGUT-03014 | ||
| CDS | 1447 | ||
| Genes | 1496 | ||
| mRNA | 1496 | ||
| misc RNA | 8 | ||
| rRNA | 1 | ||
| tRNA | 39 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 91.9 % | ||
| CheckM Contamination | 0.55 % | ||
| CheckM2 Completeness | 87.59 % | ||
| CheckM2 Contamination | 0.48 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | UHGG-TPA_MGYG-HGUT-03014 |
| GenBank Assembly Accession | GCA_902481625.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMEA5852519 [NCBI] |
| BioProject | PRJEB33885 [NCBI] |
| Submitter | EMG |
| Submission Date | 2019-08-07T10:18:43.150 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CABSXG01 |
| NCBI TaxID | 249061 |
| Isolation Source | human gut |
| Geo Location | USA |
