Genome Meta Information: Corynebacterium diphtheriae NCTC11397 (GCA_902809765.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_902809765.1 | ||
| HOMD Taxon-ID | HMT-0591 | ||
| Species Name (in use by HOMD) | Corynebacterium diphtheriae | ||
| Organism Name (as deposited) | HMT-591 Corynebacterium diphtheriae NCTC11397 | ||
| Strain or Isolate | NCTC11397 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Mycobacteriales;f__Mycobacteriaceae;g__Corynebacterium; s__Corynebacterium diphtheriae |
||
| Sequencing Technology | Illumina NextSeq 500 | ||
| Genome Coverage | 96 | ||
| Contigs |
|
||
| Total Sequence Length | 2,463,666 (bp) | ||
| GC Percentage | 53.52 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/902/809/765/GCA_902809765.1_NCTC11397 | ||
| CDS | 2328 | ||
| Genes | 2409 | ||
| mRNA | 2409 | ||
| misc RNA | 10 | ||
| rRNA | 15 | ||
| tRNA | 55 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 100 % | ||
| CheckM Completeness | 98.5 % | ||
| CheckM Contamination | 0.12 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | NCTC11397 |
| GenBank Assembly Accession | GCA_902809765.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_902809765.1 [NCBI] |
| BioSample | SAMEA6566652 [NCBI] |
| BioProject | PRJEB22103 [NCBI] |
| Submitter | INSTITUT PASTEUR |
| Submission Date | 2020-02-25T09:15:25.633 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 1717 |
| Isolation Source | |
| Geo Location | USA |
