Genome Meta Information: Enterobacter cancerogenus UPC1 (GCA_904425455.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_904425455.1 | ||
| HOMD Taxon-ID | HMT-0565 | ||
| Species Name (in use by HOMD) | Enterobacter cancerogenus | ||
| Organism Name (as deposited) | HMT-565 Enterobacter cancerogenus UPC1 | ||
| Strain or Isolate | UPC1 | ||
| GTDB (V226) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Enterobacter; s__Enterobacter cancerogenus |
||
| Sequencing Technology | MiSeq 2x150 and ONT | ||
| Genome Coverage | 143 | ||
| Contigs |
|
||
| Total Sequence Length | 4,935,357 (bp) | ||
| GC Percentage | 55.59 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/904/425/455/GCA_904425455.1_ASM90442545v1 | ||
| CDS | 4525 | ||
| Genes | 4790 | ||
| mRNA | 4790 | ||
| misc RNA | 152 | ||
| rRNA | 25 | ||
| tRNA | 87 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 98.91 % | ||
| CheckM Completeness | 99.23 % | ||
| CheckM Contamination | 1.29 % | ||
| CheckM2 Completeness | 0 % | ||
| CheckM2 Contamination | 0 % | ||
| Difference
between CheckM and CheckM2 Completeness |
200.0 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ASM90442545v1 |
| GenBank Assembly Accession | GCA_904425455.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_904425455.1 [NCBI] |
| BioSample | SAMEA7311505 [NCBI] |
| BioProject | PRJEB40359 [NCBI] |
| Submitter | GMGM |
| Submission Date | 2021-01-17T10:50:25.076 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 69218 |
| Isolation Source | activated sludge |
| Geo Location | Algeria |
