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Genome Meta Information:
Aggregatibacter
sp. HMT-458
SRR9217428-mag-bin.3 (GCA_905372845.1)
| HOMD Genome-ID |
GCA_905372845.1
|
| HOMD Taxon-ID |
HMT-458
|
| Species Name (in use by HOMD) |
Aggregatibacter sp. HMT-458
|
| Organism Name (as deposited) |
HMT-458 Aggregatibacter sp. HMT-458 SRR9217428-mag-bin.3
|
| Strain or Isolate |
SRR9217428-mag-bin.3
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter;
s__Aggregatibacter sp000466335 |
| Sequencing Technology |
|
| Genome Coverage |
10.0x
|
| Contigs |
Number of Contigs: 173
|
[Open
in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
1,704,279 (bp) |
| GC Percentage |
43.38
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/372/845/GCA_905372845.1_SRR9217428-mag-bin.3
|
| CDS |
1559
|
| Genes |
1619
|
| mRNA |
1619
|
| misc RNA |
32
|
| rRNA |
1
|
| tRNA |
26
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
93.97 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
93.61 %
|
| CheckM2 Contamination |
0.02 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
SRR9217428-mag-bin.3
|
| GenBank Assembly Accession |
GCA_905372845.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_905372845.1
[NCBI]
|
| BioSample |
SAMEA8395195
[NCBI]
|
| BioProject |
PRJEB43277
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2021-03-24T08:55:25.093
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAJPQM01
|
| NCBI TaxID |
712148
|
| Isolation Source |
not provided
|
| Geo Location |
not provided
|
