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Genome Meta Information:
Actinomyces
sp. HMT-448
SRR9217457-mag-bin.3 (GCA_905373145.1)
| HOMD Genome-ID |
GCA_905373145.1
|
| HOMD Taxon-ID |
HMT-448
|
| Species Name (in use by HOMD) |
Actinomyces sp. HMT-448
|
| Organism Name (as deposited) |
HMT-448 Actinomyces sp. HMT-448 SRR9217457-mag-bin.3
|
| Strain or Isolate |
SRR9217457-mag-bin.3
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;
s__Actinomyces sp000220835 |
| Sequencing Technology |
|
| Genome Coverage |
25.0x
|
| Contigs |
Number of Contigs: 246
|
[Open
in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
2,674,657 (bp) |
| GC Percentage |
69.79
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/905/373/145/GCA_905373145.1_SRR9217457-mag-bin.3
|
| CDS |
2264
|
| Genes |
2321
|
| mRNA |
2321
|
| misc RNA |
14
|
| rRNA |
0
|
| tRNA |
42
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
96.47 %
|
| CheckM Contamination |
1.26 %
|
| CheckM2 Completeness |
99.77 %
|
| CheckM2 Contamination |
0.11 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
SRR9217457-mag-bin.3
|
| GenBank Assembly Accession |
GCA_905373145.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_905373145.1
[NCBI]
|
| BioSample |
SAMEA8395248
[NCBI]
|
| BioProject |
PRJEB43277
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2021-03-24T08:55:27.016
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAJPSA01
|
| NCBI TaxID |
712124
|
| Isolation Source |
not provided
|
| Geo Location |
not provided
|
