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Genome Meta Information:
Aggregatibacter
sp. HMT-458
SRR1045097_bin.2_metaWRAP_v1.1_MAG (GCA_915063715.1)
| HOMD Genome-ID |
GCA_915063715.1
|
| HOMD Taxon-ID |
HMT-458
|
| Species Name (in use by HOMD) |
Aggregatibacter sp. HMT-458
|
| Organism Name (as deposited) |
HMT-458 Aggregatibacter sp. HMT-458 SRR1045097_bin.2_metaWRAP_v1.1_MAG
|
| Strain or Isolate |
SRR1045097_bin.2_metaWRAP_v1.1_MAG
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter;
s__Aggregatibacter sp000466335 |
| Sequencing Technology |
|
| Genome Coverage |
15.0x
|
| Contigs |
Number of Contigs: 112
|
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|
|
| Total Sequence Length |
1,845,464 (bp) |
| GC Percentage |
43.08
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/915/063/715/GCA_915063715.1_SRR1045097_bin.2_metaWRAP_v1.1_MAG
|
| CDS |
1718
|
| Genes |
1795
|
| mRNA |
1795
|
| misc RNA |
42
|
| rRNA |
3
|
| tRNA |
31
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
97.37 %
|
| CheckM Contamination |
0.48 %
|
| CheckM2 Completeness |
99.73 %
|
| CheckM2 Contamination |
0.02 %
|
| CRISPR-cas |
1 Contig
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
SRR1045097_bin.2_metaWRAP_v1.1
|
| GenBank Assembly Accession |
GCA_915063715.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_915063715.1
[NCBI]
|
| BioSample |
SAMEA9921405
[NCBI]
|
| BioProject |
PRJEB26096
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2021-09-25T11:20:52.691
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAJZDK01
|
| NCBI TaxID |
470564
|
| Isolation Source |
human oral metagenome
|
| Geo Location |
China
|
