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Genome Meta Information:
Aggregatibacter
aphrophilus
ERR2764820_bin.5_metaWRAP_v1.1_MAG (GCA_916048645.1)
| HOMD Genome-ID |
GCA_916048645.1
|
| HOMD Taxon-ID |
HMT-545
|
| Species Name (in use by HOMD) |
Aggregatibacter aphrophilus
|
| Organism Name (as deposited) |
HMT-545 Aggregatibacter aphrophilus ERR2764820_bin.5_metaWRAP_v1.1_MAG
|
| Strain or Isolate |
ERR2764820_bin.5_metaWRAP_v1.1_MAG
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter;
s__Aggregatibacter aphrophilus |
| Sequencing Technology |
|
| Genome Coverage |
8.0x
|
| Contigs |
Number of Contigs: 198
|
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in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
2,131,817 (bp) |
| GC Percentage |
42.2
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/048/645/GCA_916048645.1_ERR2764820_bin.5_metaWRAP_v1.1_MAG
|
| CDS |
1977
|
| Genes |
2050
|
| mRNA |
2050
|
| misc RNA |
52
|
| rRNA |
0
|
| tRNA |
21
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
96.06 %
|
| CheckM Completeness |
91.47 %
|
| CheckM Contamination |
1.55 %
|
| CheckM2 Completeness |
86.78 %
|
| CheckM2 Contamination |
0.71 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ERR2764820_bin.5_metaWRAP_v1.1
|
| GenBank Assembly Accession |
GCA_916048645.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA9943318
[NCBI]
|
| BioProject |
PRJEB41354
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2021-09-25T11:30:05.610
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAJZHV01
|
| NCBI TaxID |
732
|
| Isolation Source |
human oral metagenome
|
| Geo Location |
Germany
|
