Genome Meta Information: Rothia mucilaginosa ERR2764924_bin.3_metaWRAP_v1.1_MAG (GCA_916049685.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_916049685.1 | ||
| HOMD Taxon-ID | HMT-681 | ||
| Species Name (in use by HOMD) | Rothia mucilaginosa | ||
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 ERR2764924_bin.3_metaWRAP_v1.1_MAG | ||
| Strain or Isolate | ERR2764924_bin.3_metaWRAP_v1.1_MAG | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia; s__Rothia mucilaginosa |
||
| Sequencing Technology | |||
| Genome Coverage | 34.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,227,283 (bp) | ||
| GC Percentage | 59.76 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/049/685/GCA_916049685.1_ERR2764924_bin.3_metaWRAP_v1.1_MAG | ||
| CDS | 1742 | ||
| Genes | 1804 | ||
| mRNA | 1804 | ||
| misc RNA | 12 | ||
| rRNA | 3 | ||
| tRNA | 46 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.33 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.35 % | ||
| CRISPR-cas | No Available Data | ||
| Pangenomes (Beta) |
View in Anvi`o:
Rothia__mucilaginosa__HMT_147_681
(Interactive)
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| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | ERR2764924_bin.3_metaWRAP_v1.1 |
| GenBank Assembly Accession | GCA_916049685.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_916049685.1 [NCBI] |
| BioSample | SAMEA9943373 [NCBI] |
| BioProject | PRJEB41354 [NCBI] |
| Submitter | EMG |
| Submission Date | 2021-09-25T11:30:06.662 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CAJZIM01 |
| NCBI TaxID | 316088 |
| Isolation Source | human oral metagenome |
| Geo Location | France |
