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Genome Meta Information:
Rothia mucilaginosa DRR214962_bin.15_metaWRAP_v1.1_MAG (GCA_916438355.1)
| HOMD Genome-ID | GCA_916438355.1 |
| HOMD Taxon-ID |
HMT-681
|
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 DRR214962_bin.15_metaWRAP_v1.1_MAG |
| Strain or Isolate | DRR214962_bin.15_metaWRAP_v1.1_MAG |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia mucilaginosa |
| Sequencing Technology | |
| Genome Coverage | 1085.0x |
| Contigs |
|
| Total Sequence Length | 2,221,379 (bp) |
| GC Percentage | 59.52 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/438/355/GCA_916438355.1_DRR214962_bin.15_metaWRAP_v1.1_MAG |
| CDS | 2036 |
| Genes | 2104 |
| mRNA | 2104 |
| misc RNA | 10 |
| rRNA | 10 |
| tRNA | 47 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Rothia__mucilaginosa__HMT_147_681
(Interactive)
View SVG Image
|
|
| Genome Assembly Name | DRR214962_bin.15_metaWRAP_v1.1 |
| GenBank Assembly Accession |
GCA_916438355.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA10110177
[NCBI]
|
| BioProject |
PRJDB9452
[NCBI]
|
| Submitter | Antimicrobial Resistance Research Center, National Institute of Infectious Diseases |
| Submission Date | 2021-09-25T10:09:53.117 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project |
CAKAEO01
|
| NCBI TaxID |
316088
|
| Isolation Source | human saliva metagenome |
| Geo Location | not provided |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 81.71 % |
| CheckM Percentile | 26.744186 % |
| CheckM Contamination | 1.6 % |
|
