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Genome Meta Information:
Actinomyces
sp. HMT-170
SRR15235659_bin.27_metaWRAP_v1.1_MAG (GCA_916720155.1)
| HOMD Genome-ID |
GCA_916720155.1
|
| HOMD Taxon-ID |
HMT-170
|
| Species Name (in use by HOMD) |
Actinomyces sp. HMT-170
|
| Organism Name (as deposited) |
HMT-170 Actinomyces sp. HMT-170 SRR15235659_bin.27_metaWRAP_v1.1_MAG
|
| Strain or Isolate |
SRR15235659_bin.27_metaWRAP_v1.1_MAG
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Actinomycetaceae;g__Actinomyces;
s__Actinomyces sp000195595 |
| Sequencing Technology |
|
| Genome Coverage |
68.0x
|
| Contigs |
Number of Contigs: 187
|
[Open
in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
2,627,796 (bp) |
| GC Percentage |
68.52
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/720/155/GCA_916720155.1_SRR15235659_bin.27_metaWRAP_v1.1_MAG
|
| CDS |
2199
|
| Genes |
2252
|
| mRNA |
2252
|
| misc RNA |
14
|
| rRNA |
0
|
| tRNA |
38
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
93.48 %
|
| CheckM Contamination |
1.07 %
|
| CheckM2 Completeness |
95.81 %
|
| CheckM2 Contamination |
0.2 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
SRR15235659_bin.27_metaWRAP_v1
|
| GenBank Assembly Accession |
GCA_916720155.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_916720155.1
[NCBI]
|
| BioSample |
SAMEA10220495
[NCBI]
|
| BioProject |
PRJEB47694
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2021-10-01T10:19:22.998
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAKAQJ01
|
| NCBI TaxID |
249061
|
| Isolation Source |
human saliva metagenome
|
| Geo Location |
not provided
|
