Genome Meta Information: Alloprevotella sp. HMT-413 SRR15235657_bin.10_metaWRAP_v1.1_MAG (GCA_916720475.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_916720475.1 | ||
| HOMD Taxon-ID | HMT-413 | ||
| Species Name (in use by HOMD) | Alloprevotella sp. HMT-413 | ||
| Organism Name (as deposited) | HMT-413 Alloprevotella sp. HMT-413 SRR15235657_bin.10_metaWRAP_v1.1_MAG | ||
| Strain or Isolate | SRR15235657_bin.10_metaWRAP_v1.1_MAG | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella; s__Alloprevotella massiliensis |
||
| Sequencing Technology | |||
| Genome Coverage | 22.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,737,121 (bp) | ||
| GC Percentage | 47.31 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/916/720/475/GCA_916720475.1_SRR15235657_bin.10_metaWRAP_v1.1_MAG | ||
| CDS | 2173 | ||
| Genes | 2215 | ||
| mRNA | 2215 | ||
| misc RNA | 6 | ||
| rRNA | 0 | ||
| tRNA | 35 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 96.19 % | ||
| CheckM Contamination | 1.28 % | ||
| CheckM2 Completeness | 97.26 % | ||
| CheckM2 Contamination | 2.66 % | ||
| CRISPR-cas | 1 Contig [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | SRR15235657_bin.10_metaWRAP_v1 |
| GenBank Assembly Accession | GCA_916720475.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMEA10220485 [NCBI] |
| BioProject | PRJEB47694 [NCBI] |
| Submitter | EMG |
| Submission Date | 2021-10-01T10:19:22.779 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CAKARG01 |
| NCBI TaxID | 370804 |
| Isolation Source | human saliva metagenome |
| Geo Location | not provided |
