Genome Meta Information: Aggregatibacter segnis Marseille-P9115 (GCA_920939465.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_920939465.1 | ||
| HOMD Taxon-ID | HMT-762 | ||
| Species Name (in use by HOMD) | Aggregatibacter segnis | ||
| Organism Name (as deposited) | HMT-762 Aggregatibacter segnis Marseille-P9115 | ||
| Strain or Isolate | Marseille-P9115 | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter; s__Aggregatibacter segnis_B |
||
| Sequencing Technology | |||
| Genome Coverage | 10.0x | ||
| Contigs |
|
||
| Total Sequence Length | 2,071,265 (bp) | ||
| GC Percentage | 42.81 | ||
| MAG | |||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/920/939/465/GCA_920939465.1_PRJEB46694 | ||
| CDS | 1926 | ||
| Genes | 2188 | ||
| mRNA | 2188 | ||
| misc RNA | 184 | ||
| rRNA | 19 | ||
| tRNA | 58 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | % | ||
| CheckM Completeness | 99.89 % | ||
| CheckM Contamination | 0.23 % | ||
| CheckM2 Completeness | 99.99 % | ||
| CheckM2 Contamination | 0.03 % | ||
| CRISPR-cas | 2 Contigs [View] [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | PRJEB46694 |
| GenBank Assembly Accession | GCA_920939465.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | GCF_920939465.1 [NCBI] |
| BioSample | SAMEA9985270 [NCBI] |
| BioProject | PRJEB46694 [NCBI] |
| Submitter | IHU - Mediterranee Infection |
| Submission Date | 2021-10-06T16:38:32.483 |
| Assembly Method | |
| Assembly Level | Complete Genome |
| Sequencing Status | |
| WGS Project | |
| NCBI TaxID | 2866570 |
| Isolation Source | sputum |
| Geo Location | |
