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Genome Meta Information:
Aggregatibacter
sp. HMT-458
ERR3827215_bin.1_metaWRAP_v1.1_MAG (GCA_927911785.1)
| HOMD Genome-ID |
GCA_927911785.1
|
| HOMD Taxon-ID |
HMT-458
|
| Species Name (in use by HOMD) |
Aggregatibacter sp. HMT-458
|
| Organism Name (as deposited) |
HMT-458 Aggregatibacter sp. HMT-458 ERR3827215_bin.1_metaWRAP_v1.1_MAG
|
| Strain or Isolate |
ERR3827215_bin.1_metaWRAP_v1.1_MAG
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter;
s__Aggregatibacter sp000466335 |
| Sequencing Technology |
|
| Genome Coverage |
23.0x
|
| Contigs |
Number of Contigs: 170
|
[Open
in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
1,924,108 (bp) |
| GC Percentage |
42.95
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/927/911/785/GCA_927911785.1_ERR3827215_bin.1_metaWRAP_v1.1_MAG
|
| CDS |
2273
|
| Genes |
2350
|
| mRNA |
2350
|
| misc RNA |
30
|
| rRNA |
6
|
| tRNA |
40
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
93.76 %
|
| CheckM Contamination |
2.22 %
|
| CheckM2 Completeness |
83.32 %
|
| CheckM2 Contamination |
5.8 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ERR3827215_bin.1_metaWRAP_v1.1
|
| GenBank Assembly Accession |
GCA_927911785.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA12514470
[NCBI]
|
| BioProject |
PRJEB49987
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2022-01-22T08:16:58.266
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAKMQP01
|
| NCBI TaxID |
470564
|
| Isolation Source |
human oral metagenome
|
| Geo Location |
not provided
|
