Genome Meta Information: Alloprevotella tannerae SRR1952611_bin.42_CONCOCT_v1.1_MAG (GCA_937906735.1)
| Genome Characteristics | |||
|---|---|---|---|
| Fields | Values | ||
| HOMD Genome-ID | GCA_937906735.1 | ||
| HOMD Taxon-ID | HMT-466 | ||
| Species Name (in use by HOMD) | Alloprevotella tannerae | ||
| Organism Name (as deposited) | HMT-466 Alloprevotella tannerae SRR1952611_bin.42_CONCOCT_v1.1_MAG | ||
| Strain or Isolate | SRR1952611_bin.42_CONCOCT_v1.1_MAG | ||
| GTDB (V) Taxonomy |
d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Bacteroidales;f__Bacteroidaceae;g__Alloprevotella; s__Alloprevotella tannerae |
||
| Sequencing Technology | Illumina HiSeq 2000 | ||
| Genome Coverage | 26.0x | ||
| Contigs |
|
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| Total Sequence Length | 2,301,845 (bp) | ||
| GC Percentage | 47.11 | ||
| MAG | yes | ||
| NCBI FTP URL | ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/906/735/GCA_937906735.1_SRR1952611_bin.42_CONCOCT_v1.1_MAG | ||
| CDS | 1921 | ||
| Genes | 1972 | ||
| mRNA | 1972 | ||
| misc RNA | 4 | ||
| rRNA | 3 | ||
| tRNA | 43 | ||
| tmRNA | 1 | ||
| ANI (Average Nucluotide Identity) | 97.06 % | ||
| CheckM Completeness | 98.5 % | ||
| CheckM Contamination | 0 % | ||
| CheckM2 Completeness | 99.94 % | ||
| CheckM2 Contamination | 0.03 % | ||
| CRISPR-cas | Ambiguous [HOMD FTP] | ||
| Pangenomes | 1) OpenAnvi`o (Interactive) OpenSVG (Preview) | ||
| NCBI Genome Metadata | |
|---|---|
| Fields | Values |
| Genome Assembly Name | SRR1952611_bin.42_CONCOCT_v1.1 |
| GenBank Assembly Accession | GCA_937906735.1 [NCBI] [GTDB] |
| RefSeq Assembly Accession | [NCBI] |
| BioSample | SAMEA14075737 [NCBI] |
| BioProject | PRJEB50943 [NCBI] |
| Submitter | European Bioinformatics Institute |
| Submission Date | 2023-01-04T08:29:39.673 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | |
| WGS Project | CALCXS01 |
| NCBI TaxID | 76122 |
| Isolation Source | metagenome |
| Geo Location | not provided |
