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Genome Meta Information:
Rothia mucilaginosa SRR8114056_bin.73_CONCOCT_v1.1_MAG (GCA_937936265.1)
| HOMD Genome-ID | GCA_937936265.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 SRR8114056_bin.73_CONCOCT_v1.1_MAG |
| Strain or Isolate | SRR8114056_bin.73_CONCOCT_v1.1_MAG |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia sp001808955 |
| Sequencing Technology | Illumina HiSeq 4000 |
| Genome Coverage | 28.0x |
| Contigs |
Number of Contigs: 70
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| Total Sequence Length | 2,266,204 (bp) |
| GC Percentage | 59.64 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/937/936/265/GCA_937936265.1_SRR8114056_bin.73_CONCOCT_v1.1_MAG |
| CDS | 1752 |
| Genes | 1818 |
| mRNA | 1818 |
| misc RNA | 12 |
| rRNA | 4 |
| tRNA | 49 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) | No Available Data |
|
| Genome Assembly Name | SRR8114056_bin.73_CONCOCT_v1.1 |
| GenBank Assembly Accession |
GCA_937936265.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_937936265.1
[NCBI]
|
| BioSample |
SAMEA14086103
[NCBI]
|
| BioProject |
PRJEB51075
[NCBI]
|
| Submitter | European Bioinformatics Institute |
| Submission Date | 2023-01-04T08:32:30.563 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | CALGWP01 |
| NCBI TaxID | 43675 |
| Isolation Source | human gut metagenome |
| Geo Location | Luxembourg |
| ANI (Average Nucluotide Identity) | 94.29 % |
| CheckM Completeness | 98.48 % |
| CheckM Percentile | 55.833332 % |
| CheckM Contamination | 2.05 % |
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