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Genome Meta Information:
Brooklawnia
sp. HMT-192
ERR589597_bin.67_CONCOCT_v1.1_MAG (GCA_938041425.1)
| HOMD Genome-ID |
GCA_938041425.1
|
| HOMD Taxon-ID |
HMT-192
|
| Species Name (in use by HOMD) |
Brooklawnia sp. HMT-192
|
| Organism Name (as deposited) |
HMT-192 Brooklawnia sp. HMT-192 ERR589597_bin.67_CONCOCT_v1.1_MAG
|
| Strain or Isolate |
ERR589597_bin.67_CONCOCT_v1.1_MAG
|
GTDB (V)
Taxonomy |
Undefined |
| Sequencing Technology |
Illumina HiSeq 2000
|
| Genome Coverage |
6.0x
|
| Contigs |
Number of Contigs: 675
|
[Open
in Genome Viewer]
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Sequence]
[Linkout to
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|
|
| Total Sequence Length |
2,612,327 (bp) |
| GC Percentage |
61.56
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/938/041/425/GCA_938041425.1_ERR589597_bin.67_CONCOCT_v1.1_MAG
|
| CDS |
2717
|
| Genes |
2764
|
| mRNA |
2764
|
| misc RNA |
13
|
| rRNA |
0
|
| tRNA |
33
|
| tmRNA |
1
|
| ANI (Average Nucluotide Identity) |
%
|
| CheckM Completeness |
0 %
|
| CheckM Contamination |
0 %
|
| CheckM2 Completeness |
0 %
|
| CheckM2 Contamination |
0 %
|
| CRISPR-cas |
No Available
Data |
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
ERR589597_bin.67_CONCOCT_v1.1_
|
| GenBank Assembly Accession |
GCA_938041425.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA14084764
[NCBI]
|
| BioProject |
PRJEB51075
[NCBI]
|
| Submitter |
European Bioinformatics Institute
|
| Submission Date |
2023-01-04T08:31:42.416
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CALIAN01
|
| NCBI TaxID |
218066
|
| Isolation Source |
human gut metagenome
|
| Geo Location |
China
|
