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Genome Meta Information:
Rothia mucilaginosa hIn5OIDK9I_bin.2.MAG (GCA_943914375.1)
| HOMD Genome-ID | GCA_943914375.1 |
| HOMD Taxon-ID |
HMT-681
|
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 hIn5OIDK9I_bin.2.MAG |
| Strain or Isolate | hIn5OIDK9I_bin.2.MAG |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia mucilaginosa |
| Sequencing Technology | |
| Genome Coverage | 99.0x |
| Contigs |
Number of Contigs: 54
|
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|
| Total Sequence Length | 2,162,589 (bp) |
| GC Percentage | 59.5 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/914/375/GCA_943914375.1_hIn5OIDK9I_bin.2.MAG |
| CDS | 1716 |
| Genes | 1776 |
| mRNA | 1776 |
| misc RNA | 13 |
| rRNA | 1 |
| tRNA | 45 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
View in Anvi`o: Rothia__mucilaginosa__HMT_147_681
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|
| Genome Assembly Name | hIn5OIDK9I_bin.2.MAG |
| GenBank Assembly Accession |
GCA_943914375.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
GCF_943914375.1
[NCBI]
|
| BioSample |
SAMEA110089333
[NCBI]
|
| BioProject |
PRJEB47281
[NCBI]
|
| Submitter | NIH/NHGRI |
| Submission Date | 2022-06-14T08:20:55.523 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project |
CALUBU01
|
| NCBI TaxID |
316088
|
| Isolation Source | human skin |
| Geo Location | USA |
| ANI (Average Nucluotide Identity) | % |
| CheckM Completeness | 96.42 % |
| CheckM Percentile | 59.302326 % |
| CheckM Contamination | 0.72 % |
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