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Genome Meta Information:
Rothia mucilaginosa 1MCyelp1G5_bin.1.MAG (GCA_943914625.1)
| HOMD Genome-ID | GCA_943914625.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 1MCyelp1G5_bin.1.MAG |
| Strain or Isolate | 1MCyelp1G5_bin.1.MAG |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia mucilaginosa |
| Sequencing Technology | |
| Genome Coverage | 99.0x |
| Contigs |
Number of Contigs: 190
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| Total Sequence Length | 2,195,757 (bp) |
| GC Percentage | 59.54 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/943/914/625/GCA_943914625.1_1MCyelp1G5_bin.1.MAG |
| CDS | 1740 |
| Genes | 1801 |
| mRNA | 1801 |
| misc RNA | 14 |
| rRNA | 1 |
| tRNA | 45 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
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| Genome Assembly Name | 1MCyelp1G5_bin.1.MAG |
| GenBank Assembly Accession |
GCA_943914625.1
[NCBI]
[GTDB]
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| RefSeq Assembly Accession |
GCF_943914625.1
[NCBI]
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| BioSample |
SAMEA110088989
[NCBI]
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| BioProject |
PRJEB47281
[NCBI]
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| Submitter | NIH/NHGRI |
| Submission Date | 2022-06-14T08:20:53.170 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | CALUCT01 |
| NCBI TaxID | 43675 |
| Isolation Source | human skin |
| Geo Location | USA |
| ANI (Average Nucluotide Identity) | 94.99 % |
| CheckM Completeness | 93.11 % |
| CheckM Percentile | 15.833333 % |
| CheckM Contamination | 1.65 % |
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