Back To Genome Table
Genome Meta Information:
Aggregatibacter
segnis
SRR8786264_bin.8_metaWRAP_v1.3_MAG (GCA_947097335.1)
| HOMD Genome-ID |
GCA_947097335.1
|
| HOMD Taxon-ID |
HMT-762
|
| Species Name (in use by HOMD) |
Aggregatibacter segnis
|
| Organism Name (as deposited) |
HMT-762 Aggregatibacter segnis SRR8786264_bin.8_metaWRAP_v1.3_MAG
|
| Strain or Isolate |
SRR8786264_bin.8_metaWRAP_v1.3_MAG
|
GTDB (V)
Taxonomy |
d__Bacteria;p__Pseudomonadota;c__Gammaproteobacteria;o__Enterobacterales;f__Pasteurellaceae;g__Aggregatibacter;
s__Aggregatibacter segnis_B |
| Sequencing Technology |
Illumina HiSeq 2000
|
| Genome Coverage |
17.0x
|
| Contigs |
Number of Contigs: 140
|
[Open
in Genome Viewer]
[Show
Sequence]
[Linkout to
NCBI]
|
|
| Total Sequence Length |
1,850,914 (bp) |
| GC Percentage |
42.49
|
| MAG |
yes
|
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/947/097/335/GCA_947097335.1_SRR8786264_bin.8_metaWRAP_v1.3_MAG
|
| CDS |
1712
|
| Genes |
1861
|
| mRNA |
1861
|
| misc RNA |
118
|
| rRNA |
0
|
| tRNA |
31
|
| tmRNA |
0
|
| ANI (Average Nucluotide Identity) |
95.36 %
|
| CheckM Completeness |
87.66 %
|
| CheckM Contamination |
0.55 %
|
| CheckM2 Completeness |
89.58 %
|
| CheckM2 Contamination |
0.21 %
|
| CRISPR-cas |
2 Contigs
[View]
[HOMD FTP]
|
| Pangenomes |
1)
OpenAnvi`o (Interactive)
OpenSVG (Preview)
|
| Genome Assembly Name |
SRR8786264_bin.8_metaWRAP_v1.3
|
| GenBank Assembly Accession |
GCA_947097335.1
[NCBI]
[GTDB]
|
| RefSeq Assembly Accession |
[NCBI]
|
| BioSample |
SAMEA111493406
[NCBI]
|
| BioProject |
PRJEB53836
[NCBI]
|
| Submitter |
EMG
|
| Submission Date |
2022-10-21T08:12:16.616
|
| Assembly Method |
|
| Assembly Level |
Contig
|
| Sequencing Status |
|
| WGS
Project |
CAMURA01
|
| NCBI TaxID |
739
|
| Isolation Source |
human oral metagenome
|
| Geo Location |
not provided
|
