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Genome Meta Information:
Rothia mucilaginosa ERR10960891_bin.20_MetaWRAP_v1.3_MAG (GCA_958349375.1)
| HOMD Genome-ID | GCA_958349375.1 |
| HOMD Taxon-ID | HMT-681 |
| Species Name (in use by HOMD) | Rothia mucilaginosa |
| Organism Name (as deposited) | HMT-681 Rothia mucilaginosa clade-681 ERR10960891_bin.20_MetaWRAP_v1.3_MAG |
| Strain or Isolate | ERR10960891_bin.20_MetaWRAP_v1.3_MAG |
| GTDB Taxonomy | d__Bacteria;p__Actinomycetota;c__Actinomycetes;o__Actinomycetales;f__Micrococcaceae;g__Rothia;
s__Rothia sp902373285 |
| Sequencing Technology | Illumina NovaSeq 6000 |
| Genome Coverage | 20.0x |
| Contigs |
Number of Contigs: 119
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| Total Sequence Length | 2,132,808 (bp) |
| GC Percentage | 60.76 |
| MAG | yes |
| NCBI FTP URL |
ftp://ftp.ncbi.nlm.nih.gov/genomes/all/GCA/958/349/375/GCA_958349375.1_ERR10960891_bin.20_MetaWRAP_v1.3_MAG |
| CDS | 1662 |
| Genes | 1722 |
| mRNA | 1722 |
| misc RNA | 13 |
| rRNA | 2 |
| tRNA | 44 |
| tmRNA | 1 |
| CRISPR-cas |
No Available Data |
| Pangenomes (Beta) |
Rothia__mucilaginosa__HMT_147_681
Open SVG
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| Genome Assembly Name | ERR10960891_bin.20_MetaWRAP_v1 |
| GenBank Assembly Accession |
GCA_958349375.1
[NCBI]
[GTDB]
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| RefSeq Assembly Accession |
GCF_958349375.1
[NCBI]
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| BioSample |
SAMEA114061440
[NCBI]
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| BioProject |
PRJEB62839
[NCBI]
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| Submitter | EMG |
| Submission Date | 2023-07-17T10:07:16.642 |
| Assembly Method | |
| Assembly Level | Contig |
| Sequencing Status | live |
| WGS Project | CATWCT01 |
| NCBI TaxID | 43675 |
| Isolation Source | human feces metagenome |
| Geo Location | Kenya |
| ANI (Average Nucluotide Identity) | 88.5 % |
| CheckM Completeness | 94.63 % |
| CheckM Percentile | 20 % |
| CheckM Contamination | 1.49 % |
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