HOMD ::Species:Capnocytophaga bilenii

Species: Capnocytophaga bilenii (HMT-0332) Primary Body Site: Oral

Full Lineage: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga; Capnocytophaga bilenii

LINKS: Ecology Home | HMT-0332: [Body Sites Data] [Taxon Description] | Life Page: Capnocytophaga bilenii

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Capnocytophaga bilenii

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.13	0.18	0.04	0	0.01	0	0.05	0.02	0.04	0.01	0	0	0	0.01	0	0.01	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.03	0.01	0	0	0	0	0.01	0	0	0	0	0	0	0.01	0	0	0	0
90^thp	0.20	0.38	0.04	0.01	0.04	0	0.12	0.05	0.06	0.02	0	0	0	0.01	0	0.03	0	0
Stdev	0.23	0.39	0.13	0	0.03	0	0.05	0.03	0.10	0.03	0	0	0	0	0	0.03	0	0
Prev(%)	12.50	25.06	4.17	0	2.48	0	0	0	0	3.55	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.14	0.18	0	0.01	0	0.03	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.14	0.21	0	0	0	0.01	0	0	0	0
Stdev	0.61	0.70	0	0.05	0.01	0.15	0.01	0.01	0	0
Prev(%)	19.48	16.88	1.30	9.09	7.79	12.99	3.90	7.79	1.30	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.51	0.61	0.03	0.09	0.02	0.15	0.11	0.10	0.04	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.49	1.63	0.04	0.14	0.06	0.39	0.08	0.27	0.05	0
Stdev	1.12	0.93	0.18	0.31	0.07	0.29	0.57	0.34	0.19	0
Prev(%)	69.59	75.00	15.54	43.92	25.00	62.84	27.03	38.51	25.00	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.13	0.17	0	0	0	0.04	0.02	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.27	0.16	0	0	0	0.06	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.50	0.60	0	0	0	0.17	0.22	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	25.83	33.77	0	0	0	20.77	9.52	0	0	0	0	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.15	0.18	0	0.06	0	0.06	0.03	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.31	0.49	0	0.06	0	0.13	0.03	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.53	0.58	0	0.73	0	0.27	0.31	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	32.84	36.83	0	17.62	0	25.00	12.77	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.03	0.25	0	0.04	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.01	0.11	0	0.02	0	0.02	0.01	0	0	0
Stdev	0.16	1.22	0	0.20	0	0.01	0.01	0	0	0
Prev(%)	14.87	26.47	13.95	28.57	7.14	20.00	21.21	6.45	12.50	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.08	0.16	0.03	0	0.01	0	0.04	0	0	0	0.02	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.12	0.39	0	0	0.02	0	0.09	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.28	0.52	0.14	0	0.03	0	0.05	0	0	0.03	0.27	0	0	0	0	0	0	0
Prev(%)	20.83	29.04	4.17	0	10.90	0	50.00	0	0	7.04	0.45	0	0	0	0	0	0.51	0

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