HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Species: Capnocytophaga sp. HMT-471 (HMT-0471) Primary Body Site: Oral

Download Options
Full Lineage: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Capnocytophaga; Capnocytophaga sp. HMT-471

Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 HMP Mapping  ND:Erenv1v3  ND:Erenv3v5  ND:HMPv1v3  ND:HMPv3v5  ND:Metaphlan  ND:Dewhirst35x9
No Available Datasets for Species: Capnocytophaga sp. HMT-471
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes

SUBPSUPPPERIOAKEBMUHPASALTHRPTOTDOANALRCRRCRAFVINMVAPFOSTO
Avg (%)0.410.550.060.010.090.010.070.040.030.020.01000.0100.3400
n2439524153231872242365233014894375
10thp0.060.040000.010.010.01000000.010000
90thp1.261.460.160.010.140.010.160.090.090.050.01000.0100.8100
Stdev0.480.790.100.030.4000.070.040.060.100.030.010000.9500
Prev(%)45.8370.134.176.6712.07025.0014.294.558.751.54000012.5000
Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes