HOMD ::Species:Cardiobacterium hominis

Species: Cardiobacterium hominis (HMT-0633) Primary Body Site: Oral

Full Lineage: Bacteria; Pseudomonadota; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium; Cardiobacterium hominis

LINKS: Ecology Home | HMT-0633: [Body Sites Data] [Taxon Description] | Life Page: Cardiobacterium hominis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Cardiobacterium hominis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.12	0.97	0.14	0.03	0.04	0.01	0.06	0	0	0.01	0.01	0.01	0.04	0.05	0	0.17	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.12	0.09	0	0	0	0.01	0.02	0	0	0	0	0	0	0.05	0	0	0	0
90^thp	2.76	2.11	0.35	0.06	0.10	0.01	0.13	0.01	0.01	0.01	0.03	0.03	0.01	0.05	0	0.44	0.01	0
Stdev	1.22	0.93	0.17	0.08	0.10	0	0.07	0	0	0.05	0.02	0.02	0.19	0	0	0.45	0.01	0
Prev(%)	83.33	92.66	37.50	0	9.60	0	12.50	0	0	3.55	0	0	3.33	0	0	12.50	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.13	0.17	0.01	0.01	0.01	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.39	0.48	0	0.02	0.01	0.02	0	0	0	0
Stdev	0.22	0.25	0.07	0.02	0.02	0.02	0.01	0.01	0	0
Prev(%)	70.13	75.33	6.49	16.88	15.58	14.29	3.90	3.90	1.30	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.23	0.30	0.01	0.02	0	0.01	0.01	0.01	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.61	0.86	0	0.04	0.01	0.05	0	0	0	0
Stdev	0.44	0.48	0.07	0.06	0.02	0.03	0.03	0.04	0.01	0
Prev(%)	64.19	67.57	4.73	20.27	10.13	20.95	8.11	6.08	7.43	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.16	0.18	0.02	0	0	0	0	0	0	0	0.01	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.46	0.48	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.27	0.25	0.11	0	0	0	0	0	0	0	0.08	0	0	0	0	0	0	0
Prev(%)	76.82	85.43	14.69	0	0	0	0	0	0	0	5.17	0	0	0	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.27	0.37	0.03	0.03	0	0.02	0	0	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.02	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.65	0.81	0.03	0.08	0	0.06	0	0	0	0	0	0	0	0	0	0	0	0
Stdev	0.37	0.50	0.13	0.09	0	0.08	0	0	0	0	0	0	0	0	0	0	0	0
Prev(%)	88.89	90.98	15.31	27.79	0	36.01	0	0	0	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.03	0.07	0	0	0.01	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.07	0.19	0	0.01	0.02	0.01	0	0	0	0
Stdev	0.07	0.11	0.01	0.01	0.02	0	0	0	0	0
Prev(%)	63.51	85.29	23.26	45.71	39.29	34.00	15.15	9.68	5.00	0

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	1.14	1.02	0.05	0.04	0.03	0	0.03	0	0	0	0	0	0.03	0	0	0.08	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.03	0.07	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.79	2.31	0.06	0.18	0.08	0	0.08	0	0	0	0	0	0	0	0	0	0	0
Stdev	1.32	1.08	0.15	0.09	0.11	0	0.05	0	0	0.02	0.01	0	0.17	0	0	0.32	0	0
Prev(%)	95.83	94.19	20.83	23.53	23.94	0	50.00	0	0	8.92	0.90	4.17	3.13	0	0	7.14	0	0.18

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