HOMD ::Genus:Cloacibacterium

Genus: Cloacibacterium

Full Lineage: Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales; Weeksellaceae; Cloacibacterium
Lower rank member(s): [Species:Cloacibacterium normanense] [Species:Cloacibacterium sp. HMT-206]

LINKS: Ecology Home | Life Page: Cloacibacterium

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Genus: Cloacibacterium

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.02	0.01	0	0.01	0.01	0	0.01	0	0	0	0.04	0.01	0	0.41	0	0	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.41	0	0	0	0
90^thp	0.03	0.02	0	0.02	0.02	0	0.01	0.01	0.01	0.01	0.06	0.01	0.01	0.41	0.01	0.01	0	0.01
Stdev	0.02	0.01	0	0.01	0.04	0	0.01	0	0	0	0.20	0.02	0.01	0	0	0	0.07	0.01
Prev(%)	0	0.51	0	0	1.24	0	0	0	0	0	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0.14	0.29	0.06	0.18	0.15	0.07	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.12	0.91	0.11	0.12	0.11	0.10	0.01	0
Stdev	0.02	0.01	0.78	0.94	0.18	0.80	0.74	0.29	0.03	0
Prev(%)	9.09	6.49	18.18	28.57	23.38	20.78	18.18	18.18	11.69	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0	0	0.12	0.44	0.05	0.13	0.14	0.07	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.08	0.87	0.21	0.37	0.29	0.15	0.02	0
Stdev	0.01	0.01	0.78	2.58	0.13	0.41	0.53	0.19	0.09	0
Prev(%)	5.41	4.05	17.57	37.16	24.32	31.08	25.68	27.70	14.19	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.24	0.33	0.06	0.13	0.08	0.08	0.01	0.03	0.03	0.03	0.17	0.13	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0.01	0.28	1.21	0.18	0.23	0.20	0.13	0.01	0.10	0.02	0.03	0.30	0.25	0	0	0	0
Stdev	0	0.01	1.02	0.82	0.15	0.53	0.29	0.45	0.05	0.10	0.19	0.16	0.75	0.68	0	0	0	0
Prev(%)	0	13.24	35.66	48.63	26.85	26.15	27.38	26.00	14.19	28.00	15.23	18.41	22.41	23.50	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.45	0.89	0.11	0.19	0	0.13	0.02	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.38	2.21	0.34	0.47	0	0.22	0.02	0	0	0	0	0	0	0	0	0
Stdev	0	0	2.42	3.40	0.34	0.58	0	0.53	0.09	0	0	0	0	0	0	0	0	0
Prev(%)	0	0	23.95	34.99	26.34	33.04	0	28.22	15.33	0	0	0	0	0	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0	0	0	0	0	0	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0	0	0	0.01	0	0.01	0	0
Prev(%)	2.70	0	4.65	8.57	7.14	4.00	9.09	12.90	2.50	5.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.01	0	0	0	0.01	0	0	0	0	0	0.01	0	0	0.48	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.48	0	0	0	0
90^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0.48	0	0	0	0
Stdev	0.03	0	0	0.01	0.06	0	0	0	0	0	0.10	0	0	0	0	0	0.06	0
Prev(%)	8.33	1.26	0	5.88	6.65	0	0	0	0	0	2.70	0	0	100.00	0	0	1.01	0.18

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