HOMD ::Species:Eikenella corrodens

Species: Eikenella corrodens (HMT-0577) Primary Body Site: Oral

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Full Lineage: Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella; Eikenella corrodens

LINKS: Ecology Home | HMT-0577: [Body Sites Data] [Taxon Description] | Life Page: Eikenella corrodens

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 HMP Metaphlan Dewhirst 35x9

No Available Datasets for Species: Eikenella corrodens

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.32	0.31	0.20	0.03	0.04	0.01	0.06	0.02	0.05	0.03	0.01	0.08	0.01	0.05	0	0.03	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.10	0.07	0.01	0	0	0.01	0.02	0.01	0	0	0	0	0	0.05	0	0	0	0
90^thp	0.60	0.62	0.69	0.10	0.09	0.01	0.11	0.04	0.22	0.06	0.01	0.02	0.03	0.05	0	0.08	0	0
Stdev	0.22	0.24	0.28	0.06	0.09	0	0.04	0.02	0.08	0.06	0.01	0.37	0.02	0	0	0.09	0.01	0
Prev(%)	83.33	90.89	37.50	6.67	8.36	0	12.50	14.29	18.18	14.66	0	0	0	0	0	12.50	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.44	0.36	0.02	0.05	0.02	0.03	0.07	0.09	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.02	0.03	0	0	0	0	0	0	0	0
90^thp	1.06	0.86	0.05	0.10	0.05	0.07	0.11	0.22	0.05	0
Stdev	0.46	0.36	0.04	0.10	0.06	0.05	0.29	0.30	0.07	0
Prev(%)	92.21	92.21	29.87	51.95	38.96	51.95	28.57	40.26	25.97	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.23	0.25	0.01	0.02	0.01	0.02	0.02	0.03	0.02	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.54	0.56	0.03	0.08	0.03	0.06	0.04	0.06	0.06	0
Stdev	0.27	0.24	0.03	0.04	0.02	0.04	0.08	0.11	0.06	0
Prev(%)	85.81	88.51	12.84	37.84	27.70	39.87	16.22	31.08	32.43	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.58	0.52	0.04	0.08	0.02	0.04	0.07	0.08	0.02	0	0	0	0.01	0.03	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.09	0.04	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.21	1.25	0.09	0.20	0.05	0.11	0.14	0.23	0.05	0	0	0	0	0	0	0	0	0
Stdev	0.63	0.48	0.11	0.16	0.06	0.07	0.22	0.23	0.08	0	0	0.04	0.10	0.15	0	0	0	0
Prev(%)	96.69	98.01	44.76	63.01	41.61	54.62	41.37	53.33	26.45	0	0	4.82	4.02	7.83	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0.56	0.56	0	0.16	0.06	0	0.12	0.11	0	0	0.05	0.06	0.13	0.17	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.08	0.06	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	1.16	1.18	0	0.36	0.16	0	0.32	0.30	0	0	0.08	0.06	0.33	0.59	0	0	0	0
Stdev	0.53	0.60	0	0.41	0.13	0	0.31	0.48	0	0	0.24	0.36	0.40	0.47	0	0	0	0
Prev(%)	97.28	95.85	0	58.56	43.22	0	45.48	52.07	0	0	21.66	17.90	31.72	33.33	0	0	0	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.34	0.25	0.01	0.02	0.05	0.02	0.02	0.01	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	1.17	0.63	0.05	0.05	0.16	0.05	0.04	0.01	0.04	0
Stdev	0.58	0.31	0.02	0.04	0.13	0.03	0.03	0.02	0.02	0
Prev(%)	86.49	97.06	67.44	80.00	71.43	76.00	57.58	41.94	50.00	10.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.22	0.25	0.08	0.03	0.01	0	0.01	0.03	0.04	0.01	0	0	0	0	0	0.02	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.04	0.03	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0.49	0.56	0.29	0	0.04	0	0.03	0.12	0.15	0.03	0	0	0	0	0	0	0	0
Stdev	0.20	0.26	0.14	0.12	0.05	0	0.03	0.07	0.08	0.05	0	0	0	0	0	0.07	0	0
Prev(%)	95.83	92.93	45.83	11.77	16.75	0	12.50	18.75	28.00	18.31	0	0	3.13	0	0	7.14	0	0

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