HOMD ::Species:Kingella oralis

Species: Kingella oralis (HMT-0706) Primary Body Site: Oral

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Full Lineage: Bacteria; Pseudomonadota; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella; Kingella oralis

LINKS: Ecology Home | HMT-0706: [Body Sites Data] [Taxon Description] | Life Page: Kingella oralis

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 Eren V3-V5 HMP V1-V3 HMP V3-V5 ND:Metaphlan Dewhirst 35x9

No Available Datasets for Species: Kingella oralis

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.68	1.06	0.32	0.23	0.12	0.01	0.10	0.01	0.01	0.01	0.02	0.04	0.01	0.09	0	0.23	0.01	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.08	0.15	0.01	0	0.01	0.01	0.02	0	0	0	0	0	0	0.09	0	0	0	0
90^thp	1.46	2.18	0.45	0.23	0.27	0.01	0.22	0.01	0.02	0.02	0.03	0.03	0.01	0.09	0	0.55	0.01	0
Stdev	0.61	1.13	0.82	0.65	0.26	0	0.20	0	0.01	0.01	0.07	0.15	0.01	0	0	0.63	0.03	0.04
Prev(%)	83.33	95.19	37.50	40.00	20.12	0	12.50	0	0	6.86	1.54	0	0	0	0	12.50	1.06	0.53

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	1.03	1.30	0.10	0.18	0.03	0.11	0.01	0.01	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.05	0.10	0	0	0	0	0	0	0	0
90^thp	1.94	2.66	0.17	0.38	0.11	0.26	0.04	0.03	0.03	0
Stdev	1.86	1.95	0.41	0.66	0.05	0.20	0.03	0.02	0.01	0
Prev(%)	96.10	94.81	45.45	64.94	48.05	62.34	35.06	23.38	16.88	0

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.42	0.51	0.02	0.04	0.02	0.05	0.01	0	0.01	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0
90^thp	0.89	1.38	0.02	0.11	0.05	0.12	0.03	0.02	0.01	0
Stdev	1.19	1.07	0.12	0.13	0.07	0.13	0.02	0.01	0.02	0
Prev(%)	58.11	66.22	12.16	27.70	24.32	43.92	14.87	12.84	12.84	0

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.11	1.56	0.21	0.23	0.04	0.12	0.03	0.05	0.01	0.01	0.01	0.01	0.05	0.03	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.05	0.10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	2.57	3.72	0.43	0.72	0.12	0.31	0.06	0.04	0.03	0.02	0.01	0	0.04	0	0	0	0	0
Stdev	1.66	1.96	0.59	0.47	0.06	0.23	0.16	0.51	0.02	0.04	0.06	0.08	0.27	0.13	0	0	0	0
Prev(%)	95.36	97.35	65.03	76.71	46.31	66.15	27.08	34.00	27.10	15.33	10.92	9.35	12.64	9.22	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	1.39	2.01	0.26	0.35	0.08	0.15	0.05	0.04	0.01	0.04	0.06	0.10	0.24	0.34	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0.08	0.19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	3.29	4.82	0.66	0.68	0.17	0.39	0.08	0.07	0.04	0.09	0.09	0.15	0.65	0.95	0	0	0	0
Stdev	2.24	2.64	0.74	0.91	0.23	0.27	0.21	0.27	0.04	0.17	0.23	0.42	0.65	1.18	0.03	0	0.01	0
Prev(%)	96.79	97.56	51.11	72.95	46.80	73.21	31.46	37.71	23.11	23.37	23.89	25.31	37.93	30.00	2.87	0	1.57	0

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA
Avg (%)	0.55	0.34	0.04	0.07	0.21	0.01	0.01	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0.01	0	0	0	0	0	0	0	0
90^thp	0.79	0.75	0.11	0.13	0.39	0.04	0.02	0.01	0	0
Stdev	1.64	0.52	0.07	0.13	0.56	0.02	0.04	0.01	0	0
Prev(%)	78.38	94.12	65.12	88.57	78.57	52.00	36.36	29.03	32.50	5.00

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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