HOMD Banner
Taxonomy: V4.3   |  16S rRNA RefSeq: V16.03   |  Genomic RefSeq: V11.03   |  Viruses: V1.2

Species: Leptothrix sp. HMT-025 (HMT-0025) Primary Body Site: Environmental

Download Options
Hide Legend
Oral:
SUBP-- Subgingival Plaque
SUPP -- Supragingival Plaque
PERIO -- Periodontal
AKE -- Attached Keratinized Gingiva
BMU -- Buccal Mucosa
HPA -- Hard Palate
SAL -- Saliva
THR -- Throat
PTO -- Palatine Tonsils
TDO -- Tongue Dorsum
Nasal:
ANA -- Anterior Nares
Skin:
LRC -- L_Retroauricular Crease
RRC -- R_Retroauricular Crease
LAF -- L_Antecubital Fossa
RAF -- R_Antecubital Fossa
Vaginal:
VIN -- Vaginal Introitus
MVA -- Mid Vagina
PFO -- Posterior Fornix
Gut:
STO -- Stool

Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Available Datasets:
 ND:Mapping  ND:Erenv1v3  ND:Erenv3v5  HMP V1-V3  ND:HMPv3v5  ND:Metaphlan  Dewhirst 35x9
No Available Datasets for Species: Leptothrix sp. HMT-025
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes

Eren V1-V3 www.pnas.org (Data from healthy subjects.)
No Notes

Eren V3-V5 www.pnas.org (Data from healthy subjects.)
No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANALRCRRCLAFRAFVINMVAPFOSTO
Avg (%)0000000.01000.010.010.030.050.030000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp000000000000000000
90thp000000000000000000
Stdev0000000.08000.120.100.180.380.150000
Prev(%)0000005.06006.334.316.528.055.070000
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes

SUBPSUPPAKEBMUHPASALTHRPTOTDOANA
Avg (%)0000000000
nNaNNaNNaNNaNNaNNaNNaNNaNNaNNaN
10thp0000000000
90thp0000000000
Stdev0000000000
Prev(%)1.35000000000
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes