Species: Leptotrichia sp. HMT-221 (HMT-0221) Primary Body Site: Oral
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LINKS: Ecology Home
| HMT-0221: [Body Sites Data]
[Taxon Description]
| Life Page: Leptotrichia sp. HMT-221
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Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Body Site Legend:
| SUBP-- Subgingival Plaque |
| SUPP -- Supragingival Plaque |
| PERIO -- Periodontal |
| AKE -- Attached Keratinized Gingiva |
| BMU -- Buccal Mucosa |
| HPA -- Hard Palate |
| SAL -- Saliva |
| THR -- Throat |
| PTO -- Palatine Tonsils |
| TDO -- Tongue Dorsum |
| ANA -- Anterior Nares |
| LRC -- L_Retroauricular Crease |
| RRC -- R_Retroauricular Crease |
| LAF -- L_Antecubital Fossa |
| RAF -- R_Antecubital Fossa |
| VIN -- Vaginal Introitus |
| MVA -- Mid Vagina |
| PFO -- Posterior Fornix |
| STO -- Stool |
Prev - Prevalence
10thp - 10th percentile
90thp - 90th percentile
ND - less than 0.001%
Human Microbiome Project Mapping (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | PERIO | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.02 | 0.02 | 0.05 | 0.01 | 0.04 | 0.04 | 0.08 | 0.63 | 0.34 | 0.42 | 0.05 | 0 | 0 | 0.01 | 0 | 0.01 | 0 | 0 |
| n | 24 | 395 | 24 | 15 | 323 | 1 | 8 | 7 | 22 | 423 | 65 | 23 | 30 | 1 | 4 | 8 | 94 | 375 |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0.04 | 0 | 0.01 | 0.01 | 0.01 | 0 | 0 | 0 | 0.01 | 0 | 0 | 0 | 0 |
| 90thp | 0.05 | 0.04 | 0.06 | 0.02 | 0.09 | 0.04 | 0.20 | 1.65 | 0.92 | 1.05 | 0.01 | 0 | 0 | 0.01 | 0 | 0.01 | 0 | 0 |
| Stdev | 0.03 | 0.05 | 0.14 | 0.01 | 0.11 | 0 | 0.10 | 0.96 | 0.45 | 0.76 | 0.32 | 0 | 0 | 0 | 0 | 0.01 | 0.01 | 0.01 |
| Prev(%) | 8.33 | 7.85 | 8.33 | 0 | 6.19 | 100.00 | 12.50 | 71.43 | 40.91 | 65.72 | 3.08 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Eren V1-V3 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.01 | 0.01 | 0.02 | 0.10 | 0.30 | 0.17 | 1.15 | 1.09 | 1.02 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.02 | 0.02 | 0.03 | 0.23 | 0.76 | 0.44 | 3.16 | 3.22 | 3.34 | 0 |
| Stdev | 0.03 | 0.05 | 0.08 | 0.26 | 0.54 | 0.32 | 2.28 | 2.04 | 1.97 | 0 |
| Prev(%) | 14.29 | 12.99 | 16.88 | 42.86 | 57.14 | 50.65 | 64.94 | 68.83 | 63.64 | 1.30 |
Eren V3-V5 www.pnas.org
(Data from healthy subjects.)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | STO | |
| Avg (%) | 0.02 | 0.01 | 0.02 | 0.20 | 0.43 | 0.23 | 0.94 | 1.09 | 0.93 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.04 | 0.04 | 0.03 | 0.54 | 0.93 | 0.60 | 3.17 | 3.44 | 2.64 | 0 |
| Stdev | 0.10 | 0.04 | 0.09 | 0.51 | 1.01 | 0.51 | 1.49 | 1.83 | 2.07 | 0 |
| Prev(%) | 18.24 | 23.65 | 16.22 | 49.32 | 60.81 | 54.05 | 64.86 | 65.54 | 61.49 | 0.70 |
Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.02 | 0.02 | 0.02 | 0.10 | 0.30 | 0.13 | 0.76 | 0.65 | 0.86 | 0 | 0 | 0 | 0.03 | 0.01 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.01 | 0.02 | 0.03 | 0.24 | 0.83 | 0.35 | 2.06 | 1.92 | 2.37 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 0.11 | 0.09 | 0.09 | 0.28 | 0.62 | 0.27 | 1.72 | 1.20 | 1.94 | 0 | 0.02 | 0 | 0.20 | 0.10 | 0 | 0 | 0 | 0 |
| Prev(%) | 17.88 | 21.19 | 24.48 | 42.47 | 57.72 | 44.62 | 64.88 | 68.67 | 61.29 | 0 | 4.02 | 0 | 8.05 | 5.53 | 0 | 0 | 0 | 0 |
Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | LRC | RRC | LAF | RAF | VIN | MVA | PFO | STO | |
| Avg (%) | 0.03 | 0.03 | 0.08 | 0.31 | 0.72 | 0.34 | 1.59 | 1.48 | 1.48 | 0 | 0.02 | 0.03 | 0.09 | 0 | 0 | 0 | 0 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.04 | 0.05 | 0.09 | 0.81 | 2.15 | 1.08 | 5.39 | 4.44 | 4.40 | 0 | 0 | 0 | 0.05 | 0 | 0 | 0 | 0 | 0 |
| Stdev | 0.15 | 0.15 | 0.71 | 0.92 | 1.46 | 0.66 | 3.11 | 2.83 | 2.82 | 0 | 0.15 | 0.32 | 0.54 | 0 | 0 | 0 | 0 | 0 |
| Prev(%) | 23.46 | 26.10 | 19.01 | 46.40 | 60.36 | 56.84 | 66.36 | 67.88 | 68.37 | 0 | 6.37 | 5.56 | 11.72 | 0 | 0 | 0 | 0 | 0 |
Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)
No Notes
| SUBP | SUPP | AKE | BMU | HPA | SAL | THR | PTO | TDO | ANA | |
| Avg (%) | 0.07 | 0.03 | 0.11 | 0.15 | 0.22 | 0.15 | 0.90 | 0.22 | 0.41 | 0 |
| n | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN | NaN |
| 10thp | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
| 90thp | 0.02 | 0.06 | 0.18 | 0.22 | 0.43 | 0.42 | 1.51 | 0.79 | 1.45 | 0 |
| Stdev | 0.38 | 0.08 | 0.42 | 0.51 | 0.65 | 0.34 | 2.21 | 0.45 | 0.82 | 0 |
| Prev(%) | 35.13 | 44.12 | 41.86 | 71.43 | 64.29 | 58.00 | 72.73 | 70.97 | 72.50 | 0 |
Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)
No Notes
