HOMD ::Species:Nanosynbacter featherlites

Species: Nanosynbacter featherlites (HMT-0957) Primary Body Site: Oral

Full Lineage: Bacteria; Patescibacteria; Saccharimonadia; Saccharimonadales; Nanosynbacteraceae; Nanosynbacter; Nanosynbacter featherlites

LINKS: Ecology Home | HMT-0957: [Body Sites Data] [Taxon Description] | Life Page: Nanosynbacter featherlites

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Oral:

SUBP-- Subgingival Plaque

SUPP -- Supragingival Plaque

PERIO -- Periodontal

AKE -- Attached Keratinized Gingiva

BMU -- Buccal Mucosa

HPA -- Hard Palate

SAL -- Saliva

THR -- Throat

PTO -- Palatine Tonsils

TDO -- Tongue Dorsum

Nasal:

ANA -- Anterior Nares

Skin:

LRC -- L_Retroauricular Crease

RRC -- R_Retroauricular Crease

LAF -- L_Antecubital Fossa

RAF -- R_Antecubital Fossa

Vaginal:

VIN -- Vaginal Introitus

MVA -- Mid Vagina

PFO -- Posterior Fornix

Gut:

STO -- Stool

Prev - Prevalence
10^thp - 10^th percentile
90^thp - 90^th percentile
ND - less than 0.001%

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Available Datasets:
HMP Mapping Eren V1-V3 ND:Erenv3v5 HMP V1-V3 ND:HMPv3v5 ND:Metaphlan ND:Dewhirst35x9

No Available Datasets for Species: Nanosynbacter featherlites

Human Microbiome Project Mapping (Data from healthy subjects. - not published)

No Notes

	SUBP	SUPP	PERIO	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	RAF	VIN	MVA	PFO	STO
Avg (%)	0.34	0.24	0.34	0.01	0.02	0	0.20	0.02	0.01	0.01	0.01	0	0	0.06	0	0	0	0
n	24	395	24	15	323	1	8	7	22	423	65	23	30	1	4	8	94	375
10^thp	0.03	0.01	0.01	0	0	0	0.04	0.01	0	0	0	0	0	0.06	0	0	0	0
90^thp	0.88	0.61	1.32	0.04	0.04	0	0.36	0.03	0.02	0.03	0.01	0	0	0.06	0	0.01	0	0
Stdev	0.46	0.40	0.61	0.03	0.05	0	0.30	0.01	0.01	0.02	0.02	0	0	0	0	0	0	0.01
Prev(%)	66.67	58.48	25.00	6.67	2.48	0	37.50	0	0	1.89	0	0	0	0	0	0	0	0

Eren V1-V3 www.pnas.org (Data from healthy subjects.)

Notes:
reads equally close to Saccharibacteria bacterium HMT 352, 952, and 957 were assigned one third to each taxon

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	STO
Avg (%)	0.18	0.11	0.01	0.05	0.18	2.29	0.62	0.46	0.61	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0.11	0	0	0	0
90^thp	0.38	0.37	0.02	0.16	0.43	5.93	1.59	1.20	1.73	0
Stdev	0.22	0.18	0.05	0.09	0.21	3.01	0.80	0.71	0.81	0.01
Prev(%)	85.71	75.33	27.27	72.73	88.31	94.81	89.61	89.61	84.42	10.39

Eren V3-V5 www.pnas.org (Data from healthy subjects.)

No Notes

Human Microbiome Project 16S RefSeq (V1-V3) (Data from healthy subjects. - not published)

Notes:
Neither HMT-488 nor HMT-957 were present singularly so these reads were split evenly at these sites (AKE,BMU,HPA,LAF,PTO,RAF,RRC,SAL).

Because HMT-957 is not present individually, all equidistant reads were assigned to HMT-488 at these sites (SUBP,SUPP).

	SUBP	SUPP	AKE	BMU	HPA	SAL	THR	PTO	TDO	ANA	LRC	RRC	LAF	RAF	VIN	MVA	PFO	STO
Avg (%)	0	0	0.01	0.01	0	0.04	0	0.01	0	0	0	0	0	0.01	0	0	0	0
n	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN	NaN
10^thp	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
90^thp	0	0	0.01	0.02	0.02	0.10	0	0.01	0	0	0	0	0	0	0	0	0	0
Stdev	0	0	0.05	0.03	0.01	0.09	0	0.02	0	0	0	0.01	0.04	0.08	0	0	0	0
Prev(%)	0	0	21.68	31.51	19.46	56.92	0	25.33	0	0	0	3.97	4.60	6.91	0	0	0	0

Human Microbiome Project 16S RefSeq (V3-V5) (Data from healthy subjects. - not published)

No Notes

Dewhirst 35x9 (35 Taxa by 9 Oral Sites. - not published)

No Notes

Human Microbiome Project Metaphlan (Data from healthy subjects. - not published)

No Notes

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